Publications
Shin H, Park JE, Park HR, Choi WL, Yu SH, Koh W, Kim S, Soh H, Waminal NE, Belandres HR, Lim JY, Yi G, Ahn JH, Kim JS, Kim YM, Koo N, Kim K, Perumal S, Kang T, Kim J, Jang H, Kang DH, Kim YS, Jeong HM, Yang J, Song S, Park S, Kim JA, Lim YP, Park BS, Hsieh TF, Yang TJ, Choi D, Kim HH, Lee SS, Huh JH. (2022) Admixture of divergent genomes facilitates hybridization across species in the family Brassicaceae. New Phytol. 235: 743-758. doi.org/10.1111/nph.18155
Shin H, Choi WL, Lim JY, Huh JH. (2022) Epigenome editing: targeted manipulation of epigenetic modifications in plants. Genes & Genomics 44: 307-315. doi.org/10.1007/s13258-021-01199-5
Shin H, Park HR, Park JE, Yu SH, Yi G, Kim JH, Koh W, Kim HH, Lee SS, Huh JH. (2021) Reduced fertility caused by meiotic defects and micronuclei formation during microsporogenesis in xBrassicoraphanus. Genes & Genomics 43: 251-258. doi.org/10.1007/s13258-021-01050-x
Choi WL, Mok YG, Huh JH. (2021) Application of 5-Methylcytosine DNA Glycosylase to the Quantitative Analysis of DNA Methylation. Int. J. Mol. Sci. 22:1072. doi.org/10.3390/ijms22031072
Park HR, Park JE, Kim JH, Shin H, Yu SH, Son S, Yi G, Lee SS, Kim HH, Huh JH. (2020) Meiotic chromosome stability and suppression of crossover between non-homologous chromosomes in xBrassicoraphanus, an intergeneric allotetraploid derived from a cross between Brassica rapa and Raphanus sativus. Front. Plant Sci. 11: 851. doi.org/10.3389/fpls.2020.00851
Lee SS, Son CY, Kim J, Park JE, Yu SH, Yi G, Huh JH. (2020) Properties of self‑sterile but cross‑fertile allopolyploids synthesized between Brassica rapa and Raphanus sativus. Hort. Environ. Biotechnol. 61: 163-171. doi.org/10.1007/s13580-019-00206-9
Lee SK, Kim H, Cho JI, Nguyen CD, Moon S, Park JE, Park HR, Huh JH, Jung KH, Guiderdoni E, Jeon JS. (2020) Deficiency of rice hexokinase HXK5 impairs synthesis and utilization of starch in pollen grains and causes male sterility. J. Exp. Bot. 71: 116-125. doi.org/10.1093/jxb/erz436
Yi G, Shin H, Yu SH, Park JE, Kang T, Huh JH. (2019) A genetic characterization of Korean waxy maize (Zea mays L.) landraces having flowering time variation by RNA sequencing. Sci. Rep. 9: 20023. doi.org/10.1038/s41598-019-56645-y
Park HR, Kang T, Yi G, Yu SH, Shin H, Kim GW, Park JE, Kim YS, Huh JH. (2019) Genome divergence in Brassica rapa subspecies revealed by whole genome analysis on a doubled-haploid line of turnip. Plant Biotechnol Rep. 13: 677-687. doi.org/10.1007/s1181 6-019-00565 -w
Zhang C, Hung YH, Rim HJ, Zhang D, Frost JM, Shin H, Jang H, Liu F, Xiao W, Iyer LM, Aravind L, Zhang XQ, Fischer RL*, Huh JH*, Hsieh TF*. (2019) The catalytic core of DEMETER guides active DNA demethylation in Arabidopsis. Proc. Natl. Adad. Sci. USA 116: 17563-17571. doi.org/10.1073/pnas.1907290116 * co-corresponding author.
Chung SW, Yu DJ, Oh HD, Ahn JH, Huh JH, Lee HJ. (2019) Transcriptional regulation of abscisic acid biosynthesis and signal transduction, and anthocyanin biosynthesis in 'Bluecrop' highbush blueberry fruit during ripening. PLoS ONE. 14:e0220015.
Belandres HR, Zhou HC, Waminal NE, Lee SS, Huh JH, Kim HH. (2019) Cytogenetic analyses revealed different genome rearrangement footprints in four xBrassicoraphanus lines with different fertility rates. Plant Breed. Biotech. 7:95-105.
Kim JS, Lim JY, Shin H, Kim BG, Yoo SD, Kim WT, Huh JH. (2019) ROS1-dependent DNA demethylation is required for ABA-inducible NIC3 expression. Plant Physiol. 179: 1810-1821.
Yi G, Kim JS, Park JE, Shin H, Yu SH, Park SH, Huh JH. (2018) MYB1 transcription factor is a candidate responsible for red root skin in radish (Raphanus sativus L.). PLoS ONE. 13: e0204241.
So KK, Ko YH, Chun J, Bal J, Jeon J, Kim JM, Choi J, Lee YH, Huh JH, Kim DH. (2018) Global DNA methylation in the chestnut blight fungus Cryphonectria parasitica and genome-wide changes in DNA methylation accompanied with sectorization. Front. Plant Sci. 9:103.
Kim S et al. (2017) New reference genome sequences of hot pepper reveal the massive evolution of plant disease-resistance genes by retroduplication. Genome Biol. 18:210.
Mok YG, Choi K, Hong S, Huh JH. (2017) DEMETER plant DNA demethylase induces antiviral response by interferon signalling in animal cells. Sci. Rep. 7: 9160.
Yi G, Lim S, Chae WB, Park JE, Park HR, Lee EJ, Huh JH. (2016) Root glucosinolate profiles for screening of radish (Raphanus sativus L.) genetic resources. J. Agric. Food Chem. 64: 61-70. doi.org/10.1021/acs.jafc.5b04575
Ahn JH, Kim JS, Kim S, Soh HY, Shin H, Jang H, Ryu JH, Kim A, Yun KY, Kim S, Kim KS, Choi D, Huh JH. (2015) De novo transcriptome analysis to identify anthocyanin biosynthesis genes responsible for tissue-specific pigmentation in Zoysiagrass (Zoysia japonica Steud.). PLoS ONE 10(4): e0124497
Belandres HR, Waminal NE, Hwang YJ, Park BS, Lee SS, Huh JH, Kim HH. (2015) FISH karyotype and GISH meiotic pairing analyses of a stable intergeneric hybrid xBrassicoraphanus line BB#5. Kor. J. Hort. Sci. Technol. 33: 83-92.
Yi G, Park H, Kim JS, Chae WB, Park S, Huh JH. (2014) Identification of three FLOWERING LOCUS C genes responsible for vernalization response in radish (Raphanus sativus L.). Hort. Environ. Biotechnol. 55: 548-556.
Lee J, Jang H, Shin H, Choi WL, Mok YG, Huh JH. (2014) AP endonucleases process 5-methylcytosine excision intermediates during active DNA demethylation in Arabidopsis. Nucleic Acids Res. 42: 11408-11418.
Brooks SC, Fischer RL, Huh JH, Eichman BF. (2014) 5-methylcytosine recognition by Arabidopsis thaliana DNA glycosylases DEMETER and DML3. Biochemistry 53: 2525-2532.
Jang H, Shin H, Eichman BF, Huh JH. (2014) Excision of 5-hydroxymethylcytosine by DEMETER family DNA glycosylases. Biochem. Biophys. Res. Commun. 446: 1067-1072.
Kim S et al. (2014) Genome sequence of the hot pepper provides insights into the evolution of pungency in Capsicum species. Nat. Genet. 46: 270-278.
Huh JH, Rim HJ (2013) DNA demethylation and gene imprinting in flowering plants. Signaling and Communications in Plants. 18: 201-232.
Kim OR, Cho MC, Kim BD, Huh JH. (2010) A splicing mutation in the gene encoding phytoene synthase causes orange coloration in Habanero pepper fruits. Mol. Cells. 30: 569-574.
Mok YG, Uzawa R, Lee J, Weiner GM, Eichman BF, Fischer RL, Huh JH. (2010) Domain structure of the DEMETER 5-methylcytosine DNA glycosylase. Proc. Natl. Adad. Sci. USA 107: 19225-19230.
Ha SC, Pereira JH, Jeong JH, Huh JH, Kim SH. (2009) Purification of human transcription factors Nanog and Sox2, each in complex with Skp, an Escherichia coli periplasmic chaperone. Protein Expr. Purif. 67:164-8.
Huh JH, Bauer MJ, Hsieh TF, Fischer RL. (2008) Cellular programming of plant gene imprinting. Cell 132: 735-744.
Huh JH, Bauer MJ, Hsieh TF, Fischer RL. (2007) Endosperm gene imprinting and seed development. Curr. Opin. Genet. Dev. 17: 480-485.
Penterman J, Zilberman D, Huh JH, Ballinger T, Henikoff S, Fischer RL. (2007) DNA demethylation in the Arabidopsis genome. Proc. Natl. Acad. Sci. USA 104: 6752-6757.
Penterman J, Huh JH, Hsieh TF, Fischer RL. (2007) Genomic imprinting in Arabidopsis thaliana and Zea mays. Plant Cell Monogr. 8: 219-239. (Book)
Gehring M**, Huh JH**, Hsieh TF, Penterman J, Choi Y, Harada JJ, Goldberg RB, Fischer RL. (2006) DEMETER DNA glycosylase establishes MEDEA polycomb gene self-imprinting by allele-specific demethylation, Cell 124: 495-506. ** co-first author.
Huh JH, Kang BC, Nahm SH, Kim S, Ha KS, Lee MH, Kim BD. (2001) A candidate gene approach identified phytoene synthase as the locus for mature fruit color in red pepper (Capsicum spp.). Theor. Appl. Genet. 102: 524-530.
Kang BC, Nahm SH, Huh JH, Yoo HS, Yu JW, Lee MH, Kim BD. (2001) An interspecific (Capsicum annuum x C. chinese) F2 linkage map in pepper using RFLP and AFLP markers. Theor. Appl. Genet. 102: 531-539.
Yoo HS, Kang BC, Huh JH, Nahm SH, Kim BS, Kim BD. (2001) Identification of AFLP markers linked to pepper disease resistance gene Bs3 for Xanthomonas campestris pv. vesicatoria. Kor. J. Breed. 33: 167-174.
Kang BC, Nahm SH, Huh JH, Yoo HS, Kim BD. (2000) Construction of a molecular linkage map in hot pepper. Acta. Hort. 521: 165-171.